R-universe - mjnueda (mjnueda)

maSigPro - Significant Gene Expression Profile Differences in Time Course Gene Expression Data

maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.

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microarrayrna-seqdifferential expressiontimecourse

5.49 score 153 scripts 916 downloads

lpda - Linear Programming Discriminant Analysis

Classification method obtained through linear programming. It is advantageous with respect to the classical developments when the distribution of the variables involved is unknown or when the number of variables is much greater than the number of individuals. Mathematical details behind the method are published in Nueda, et al. (2022) "LPDA: A new classification method based on linear programming". <doi:10.1371/journal.pone.0270403>.

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2.30 score 4 scripts 387 downloads